18 genes in 18 strains
| General information | |
| CEG ID: | CEG0107 |
| Function: | 16S rRNA-processing protein RimM |
| Phyletic Profile: | Genes in 18/29 species: single-copy in18 species and multi-copy in 0 species. |
| In Genus: | 15/20 in Genus Shewanella,Vibrio,Staphylococcus,Acinetobacter,Burkholderia,Campylobacteraceae,Helicobacter,Streptococcus,Caulobacter,Mycoplasma,Pseudomonas,Francisella,Salmonella,Porphyromonadaceae,Escherichia |
| In Family: | 14/18 in Family Streptococcaceae,Francisellaceae,Enterobacteriaceae,Campylobacterales,Moraxellaceae,Mycoplasmataceae,Shewanellaceae,Vibrionaceae,Caulobacteraceae,Helicobacteraceae,Pseudomonadaceae,Burkholderiaceae,Staphylococcaceae,Bacteroidales |
| In Order: | 13/16 in Order Lactobacillales,Burkholderiales,Bacteroidia,Campylobacterales,Vibrionales,Epsilonproteobacteria,Caulobacterales,Thiotrichales,Enterobacteriales,Alteromonadales,Mycoplasmatales,Bacillales,Pseudomonadales |
| In Class: | 8/9 in Class Betaproteobacteria,Bacteroidetes,Gammaproteobacteria,delta/epsilon subdivisions,Epsilonproteobacteria,Bacilli,Mollicutes,Alphaproteobacteria |
| In Phylum: | 4/5 in Phylum Tenericutes,Firmicutes,Proteobacteria,Bacteroidetes/Chlorobi group |
| CEG_gene ID | Gene name(s) | Function | Pathway | Struct | Drug | ESAHP | Organism | DEG ID | Virulence | Protein-Ligand |
|---|---|---|---|---|---|---|---|---|---|---|
| CEG0107_15640584 | rimM | 16S rRNA-processing protein RimM | 1.3 | vch | DEG10030111 | |||||
| CEG0107_15900672 | rimM | 16S rRNA processing protein RimM | 1.1 | stm | DEG10070039 | |||||
| CEG0107_15645763 | HP1149 | hypothetical protein | 2.8 | hpy | DEG10080212 | |||||
| CEG0107_15610044 | rimM | 16S rRNA-processing protein | 2.1 | mpu | DEG10100465 | |||||
| CEG0107_16765990 | rimM | 16S rRNA processing protein | 2.6 | sao | DEG10110151 | |||||
| CEG0107_118498129 | rimM | 16S rRNA processing protein RimM | 1.5 | ftn | DEG10120329 | |||||
| CEG0107_50086297 | rimM | 16S rRNA processing protein | 0.724 | aci | DEG10130448 | |||||
| CEG0107_116051742 | rimM | 16S rRNA-processing protein | 2.5 | pau | DEG10150089 | |||||
| CEG0107_29142999 | yfjA/rimM | 16S rRNA-processing protein RimM | 2.6 | spr | DEG10160181 | |||||
| CEG0107_88194946 | rimM | 16S rRNA-processing protein RimM | 0.899 | stt | DEG10170149 | |||||
| CEG0107_90111466 | rimM | 16S rRNA processing protein rimM | 7.4 | eco | DEG10180405 | |||||
| CEG0107_221236702 | rimM | 16S rRNA-processing protein RimM | 0.282 | ccr | DEG10200454 | |||||
| CEG0107_188995016 | rimM | 16S rRNA-processing protein RimM | 6.2 | pga | DEG10220235 | |||||
| CEG0107_83719306 | rimM | 16S rRNA-processing protein RimM | 4.5 | bte | DEG10240190 | |||||
| CEG0107_414561891 | rimM | 16S rRNA processing protein RimM | no hit | som | DEG10290135 | |||||
| CEG0107_218562351 | rimM | 16S rRNA processing protein | 1.1 | cjs | DEG10310094 | |||||
| CEG0107_378700587 | rimM | 16S rRNA processing protein RimM | 2.6 | set | DEG10320215 | |||||
| CEG0107_53720100 | rimM | 16S rRNA-processing protein RimM | 1.1 | bpk | DEG10350310 |