General information CEG ID: CEG0087 Function: RNA polymerase major rho factor Phyletic Profile: Genes in 19 /29 species: single-copy in19 species and multi-copy in 0 species. In Genus: 13 /20 in GenusShewanella,Vibrio,Staphylococcus,Acinetobacter,Mycobacterium,Haemophilus,Porphyromonadaceae,Streptococcus,Mycoplasma,Pseudomonas,Francisella,Salmonella,EscherichiaIn Family: 12 /18 in FamilyStreptococcaceae,Francisellaceae,Enterobacteriaceae,Moraxellaceae,Mycoplasmataceae,Shewanellaceae,Pasteurellaceae,Vibrionaceae,Mycobacteriaceae,Pseudomonadaceae,Staphylococcaceae,BacteroidalesIn Order: 11 /16 in OrderLactobacillales,Thiotrichales,Bacteroidia,Vibrionales,Actinomycetales,Pasteurellales,Enterobacteriales,Alteromonadales,Bacillales,Mycoplasmatales,PseudomonadalesIn Class: 5 /9 in ClassBacteroidetes,Actinobacteria,Mollicutes,Gammaproteobacteria,BacilliIn Phylum: 5 /5 in PhylumTenericutes,Firmicutes,Proteobacteria,Bacteroidetes/Chlorobi group,Actinobacteria
CEG_gene ID Gene name(s) Function Pathway Struct Drug ESAHP Organism DEG ID Virulence Protein-Ligand CEG0087 _ 15927141 sigA RNA polymerase major rho factor 1.2 spu DEG10020169 Potential CEG0087 _ 15640541 VC0517 RNA polymerase sigma factor RpoD 2.4e-004 vch DEG10030098 Potential CEG0087 _ 16272477 rpoD RNA polymerase sigma-70 factor 0.015 hin DEG10050170 Potential CEG0087 _ 12045103 rpoD RNA polymerase sigma factor RpoD 3.9 mtu DEG10060210 Potential CEG0087 _ 15903023 rpoD RNA polymerase sigma factor 70 0.338 stm DEG10070162 Potential CEG0087 _ 15609840 sigA RNA polymerase sigma factor RpoD 0.027 mpu DEG10100429 Determinate CEG0087 _ 39546362 rpoD DNA-directed RNA polymerase subunit 0.851 sao DEG10110169 Potential CEG0087 _ 118497505 rpoD RNA polymerase sigma-70 factor 0.915 ftn DEG10120214 Potential CEG0087 _ 50085952 rpoD sigma D (sigma 70) factor of RNA polymerase 0.078 aci DEG10130359 Potential CEG0087 _ 15828925 rpoD(sigA) RNA polymerase sigma factor 0.323 mge DEG10140168 Potential CEG0087 _ 116054304 rpoD RNA polymerase sigma factor RpoD 0.257 pau DEG10150019 Potential CEG0087 _ 29143472 rpoD RNA polymerase sigma factor RpoD 0.970 spr DEG10160217 Potential CEG0087 _ 88195369 SAOUHSC_01662 RNA polymerase sigma factor RpoD See struct 4G6D 4G8X 4G94 1.2 stt DEG10170207 Potential CEG0087 _ 16130963 rpoD RNA polymerase sigma factor rpoD See struct 1SIG 1TLH 2P7V 3IYD 3T72 4JK1 4JK2 4JKR 4KMU 4KN4 4KN7 4LJZ 4LK0 4LK1 4LLG 4MEX 4MEY 4YFK 4YFN 4YFX 4YG2 4YLN 4YLO 4YLP 0.056 eco DEG10180457 Potential See receptor_ligand 0106998 0168463 0168464 0168465 0168466 0168467 0168468 0168469 0168470 0168471 0168472 0168473 0168474 0168475 0168476 0242549 0242550 0242551 0242552 0242553 0242554 0242974 0242975 0242976 0242977 0242978 0242979 0245682 0245683 0245684 0245685 0245686 0245687 0245688 0245689 0246388 0246389 0246390 0246391 0246392 0246393 0246394 0246395 0246396 0246397 0246398 0246399 0246400 0246401 0246402 0246403 0246404 0246405 0246406 0246407 0246408 0246409 0246410 0246411 0246412 0246413 0261939 0261940 0261941 0261942 0261943 0261944 0261945 0261946 0261947 0261948 0261949 0261950 0261951 0261952 0261953 0261954 0261955 0261956 0261957 0261958 0261959 0261960 0261961 0261962 0277540 0277541 0277542 0277543 0277544 0277545 0277546 0277547 0277548 0277549 0277550 0277551 0277552 0277553 0277554 0277555 0310049 0310050 0310051 0310052 0310053 0310054 0310055 0310056 0310057 0310058 0310059 0310060 0310061 0310062 0310063 0310064 0310065 0310066 0310067 0310068 0310069 0310070 0310071 0310072 0310073 0310074 0310075 0310076 0310077 0310078 0310584 0310585 0310586 0310587 0310588 0310589 0310590 0310591 0312803 0312804 0312805 0312806 0312807 0312808 0312809 0312810 0312811 0312812 0312813 0312814 0312815 0312816 0312817 0312818 0312819 0312820 0312821 0312822 0312823 0312824 0312825 0312826 0312827 0312828 0312829 0312830 0312831 0312832 0312833 0312834 0312835 0312836 0312837 0312838 0312839 0312840 0312841 0312842 0312843 0312844 0312845 0312846 0312847 0312848 0312849 0312850 0312851 0312852 0312853 0312854 0312855 0312856 0312857 0312858 0312859 0312860 0312861 0312862 0312863 0312864 0312865 0312866 0312867 0312868 0312869 0312870 0312871 0312872 0312873 0312874 0312875 0312876 0312877 0312878 0312879 0312880 0312881 0312882 0312883 0312884 0312885 0312886 0312887 0312888 0312889 0312890 0312891 0312892 0312893 0312894 0312895 0312896 0312897 0312898 0312899 0312900 0312901 CEG0087 _ 125717671 rpoD RNA polymerase sigma factor RpoD 0.357 ssa DEG10210087 Potential CEG0087 _ 188994502 rpoD RNA polymerase sigma factor RpoD 0.365 pga DEG10220126 CEG0087 _ 24372864 rpoD RNA polymerase sigma-70 factor RpoD 0.664 som DEG10290118 Potential CEG0087 _ 378701116 rpoD RNA polymerase sigma-70 factor 0.851 set DEG10320248 Potential CEG0087 _ 409994562 rpoD RNA polymerase sigma factor RpoD 0.851 spr DEG10330220 Potential