General information CEG ID: CEG0054 Function: RNA polymerase (alpha subunit) Phyletic Profile: Genes in 20 /29 species: single-copy in19 species and multi-copy in 1 species. In Genus: 16 /20 in GenusShewanella,Vibrio,Staphylococcus,Acinetobacter,Bacteroidaceae,Mycobacterium,Haemophilus,Bacillus,Porphyromonadaceae,Streptococcus,Burkholderia,Caulobacter,Mycoplasma,Francisella,Salmonella,EscherichiaIn Family: 14 /18 in FamilyBacillaceae,Streptococcaceae,Francisellaceae,Enterobacteriaceae,Moraxellaceae,Mycoplasmataceae,Shewanellaceae,Pasteurellaceae,Vibrionaceae,Mycobacteriaceae,Caulobacteraceae,Burkholderiaceae,Staphylococcaceae,BacteroidalesIn Order: 13 /16 in OrderLactobacillales,Thiotrichales,Bacteroidia,Burkholderiales,Vibrionales,Actinomycetales,Caulobacterales,Pasteurellales,Enterobacteriales,Alteromonadales,Bacillales,Mycoplasmatales,PseudomonadalesIn Class: 7 /9 in ClassBetaproteobacteria,Gammaproteobacteria,Bacteroidetes,Mollicutes,Actinobacteria,Bacilli,AlphaproteobacteriaIn Phylum: 5 /5 in PhylumTenericutes,Firmicutes,Proteobacteria,Bacteroidetes/Chlorobi group,Actinobacteria
CEG_gene ID Gene name(s) Function Pathway Struct Drug ESAHP Organism DEG ID Virulence Protein-Ligand CEG0054 _ 15927804 rpoA DNA-directed RNA polymerase alpha chain See pathway sau00230+SA2023 sau00240+SA2023 sau03020+SA2023 See drug DB00615 DB08226 DB08266 0.011 spu DEG10020252 CEG0054 _ 15642566 VC2571 DNA-directed RNA polymerase subunit alpha 2.0 vch DEG10030512 CEG0054 _ 16272744 rpoA DNA-directed RNA polymerase subunit alpha See pathway hin00230+HI0802 hin00240+HI0802 hin03020+HI0802 See drug DB00615 DB08226 DB08266 1.3 hin DEG10050288 CEG0054 _ 12045030 rpoA DNA-directed RNA polymerase See pathway mtu00230+Rv3457c mtu00240+Rv3457c mtu03020+Rv3457c See drug DB00615 DB08226 DB08266 0.614 mtu DEG10060148 CEG0054 _ 15610593 rpoA DNA-directed RNA polymerase subunit alpha See pathway mpu00230+MYPU_5610 mpu00240+MYPU_5610 mpu03020+MYPU_5610 See drug DB00615 DB08226 DB08266 0.086 mpu DEG10100546 CEG0054 _ 16766704 rpoA RNA polymerase alpha subunit See pathway sao00230+SAOUHSC_02485 sao00240+SAOUHSC_02485 sao03020+SAOUHSC_02485 See drug DB00615 DB08226 DB08266 0.054 sao DEG10110177 CEG0054 _ 118496877 rpoA DNA-directed RNA polymerase See pathway ftn00230+FTN_0264 ftn00230+FTN_1412 ftn00240+FTN_0264 ftn00240+FTN_1412 ftn03020+FTN_0264 ftn03020+FTN_1412 See drug DB00615 DB08226 DB08266 0.274 ftn DEG10120078 CEG0054 _ 118497985 FTN_1412 DNA-directed RNA polymerase 4.8 ftn DEG10120307 CEG0054 _ 50086190 rpoA RNA polymerase See pathway aci00230+ACIAD3194 aci00240+ACIAD3194 aci03020+ACIAD3194 See drug DB00615 DB08226 DB08266 1.1 aci DEG10130408 CEG0054 _ 15829032 rpoA DNA-directed RNA polymerase alpha subunit See pathway mge00230+MG_177 mge00240+MG_177 mge03020+MG_177 See drug DB00615 DB08226 DB08266 0.021 mge DEG10140215 CEG0054 _ 29144355 rpoA DNA-directed RNA polymerase subunit alpha See pathway spr00230+spr0215 spr00240+spr0215 spr03020+spr0215 See drug DB00615 DB08226 DB08266 0.054 spr DEG10160325 CEG0054 _ 88196136 SAOUHSC_02485 DNA-directed RNA polymerase subunit alpha 0.011 stt DEG10170308 CEG0054 _ 16131174 rpoA RNA polymerase See pathway eco00230+b3295 eco00240+b3295 eco03020+b3295 See struct 1BDF 1COO 1LB2 1XS9 3IYD 3K4G 3LU0 3N4M 3N97 4JK1 4JK2 4KMU 4KN4 4KN7 4MEX 4MEY 4YG2 4YLN 4YLO 4YLP See drug DB00615 DB08226 DB08266 0.054 eco DEG10190205 See receptor_ligand 0031782 0031783 0031784 0031785 0031786 0031787 0031788 0068384 0068385 0168463 0168464 0168465 0168466 0168467 0168468 0168469 0168470 0168471 0168472 0168473 0168474 0168475 0168476 0177572 0177573 0177574 0182617 0182618 0182619 0182620 0182621 0182622 0182623 0183322 0183323 0183324 0183325 0183326 0183327 0242549 0242550 0242551 0242552 0242553 0242554 0242974 0242975 0242976 0242977 0242978 0242979 0246388 0246389 0246390 0246391 0246392 0246393 0246394 0246395 0246396 0246397 0246398 0246399 0246400 0246401 0246402 0246403 0246404 0246405 0246406 0246407 0246408 0246409 0246410 0246411 0246412 0246413 0277540 0277541 0277542 0277543 0277544 0277545 0277546 0277547 0277548 0277549 0277550 0277551 0277552 0277553 0277554 0277555 0310584 0310585 0310586 0310587 0310588 0310589 0310590 0310591 0312803 0312804 0312805 0312806 0312807 0312808 0312809 0312810 0312811 0312812 0312813 0312814 0312815 0312816 0312817 0312818 0312819 0312820 0312821 0312822 0312823 0312824 0312825 0312826 0312827 0312828 0312829 0312830 0312831 0312832 0312833 0312834 0312835 0312836 0312837 0312838 0312839 0312840 0312841 0312842 0312843 0312844 0312845 0312846 0312847 0312848 0312849 0312850 0312851 0312852 0312853 0312854 0312855 0312856 0312857 0312858 0312859 0312860 0312861 0312862 0312863 0312864 0312865 0312866 0312867 0312868 0312869 0312870 0312871 0312872 0312873 0312874 0312875 0312876 0312877 0312878 0312879 0312880 0312881 0312882 0312883 0312884 0312885 0312886 0312887 0312888 0312889 0312890 0312891 0312892 0312893 0312894 0312895 0312896 0312897 0312898 0312899 0312900 0312901 CEG0054 _ 221234267 rpoA DNA-directed RNA polymerase subunit alpha See pathway ccr00230+CC_1272 ccr00240+CC_1272 ccr03020+CC_1272 See drug DB00615 DB08226 DB08266 5.0 ccr DEG10200158 CEG0054 _ 125717012 rpoA DNA-directed RNA polymerase subunit alpha See pathway ssa00230+SSA_0132 ssa00240+SSA_0132 ssa03020+SSA_0132 See drug DB00615 DB08226 DB08266 1.3 ssa DEG10210029 CEG0054 _ 188995705 rpoA DNA-directed RNA polymerase subunit alpha See pathway pgn00230+PGN_1841 pgn00240+PGN_1841 pgn03020+PGN_1841 See drug DB00615 DB08226 DB08266 3.4 pga DEG10220394 CEG0054 _ 83720584 rpoA DNA-directed RNA polymerase subunit alpha See pathway bte00230+BTH_I3042 bte00240+BTH_I3042 bte03020+BTH_I3042 See drug DB00615 DB08226 DB08266 1.9 bte DEG10240313 CEG0054 _ 24371854 rpoA DNA-directed RNA polymerase alpha subunit RpoA See pathway son00230+SO_0256 son00240+SO_0256 son03020+SO_0256 See drug DB00615 DB08226 DB08266 0.654 som DEG10290056 CEG0054 _ 375360215 rpoA putative DNA-directed RNA polymerase alpha chain See pathway bfg00230+BF638R_4014 bfg00240+BF638R_4014 bfg03020+BF638R_4014 See drug DB00615 DB08226 DB08266 0.137 bfr DEG10340455 CEG0054 _ 53720795 rpoA DNA-directed RNA polymerase subunit alpha See pathway bps00230+BPSL3187 bps00240+BPSL3187 bps03020+BPSL3187 See drug DB00615 DB08226 DB08266 1.9 bpk DEG10350394