Geptop 3.0

Geptop 3.0 is an updated version of Geptop 2.0, which is more accurate and comprehensive but takes longer.

Compared with Geptop 2.0, Geptop 3.0 mainly has three improvements, namely, the increase in the number of reference species (from 37 to 79), the change in the evolutionary distance weighted coefficient, and the addition of a machine learning model based on the frequency characteristics of nucleic acid sequences. In addition, due to the need to extract nucleic acid sequence characteristics, the main difference between Geptop 3.0 and Geptop 2.0 in use is that Geptop 3.0 can only make essential gene prediction through the nucleic acid sequence file of species, and cannot use amino acid sequence file.